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The RNA Transcript, April 24th 2023

Lectures

RNA Collaborative Seminar

Bay Area RNA Club (BARC)


Genomic expression cassettes drive unexpected RNAs and off-target effects

Speaker: Gloria Brar, Ph.D.


Progress in RNA 3D modeling?

Speaker: Rhiju Das, Ph.D.


Moderator: Stefan Oberlin, Ph.D.


Wednesday, April 26, 2023.

4:00 PM

Zoom.

U-M RNA Innovation Seminar

Talk Title TBA


Lydia Contreras, Ph.D.

Professor

Paul D & Betty Robertson Meek Centennial Professorship in Chemical Engineering

Biotechnology

Environmental Engineering

Modeling & Simulation


Monday, May 8, 2023

4:00 - 5:00 PM

ABC Seminar Room BSRB, Zoom

LSA Lecture

Can RNA Do It All? From Spawning Life on Earth to Fueling Modern Personalized Medicine


Nils Walter, Ph.D.

Francis S Collins Collegiate Professor of Chemistry, Biophysics & Biological Chemistry

Professor of Chemistry, Biophysics, College of Literature, Science & the Arts

Program Associate, Office of Graduate & Postdoctoral Studies & Professor of Biological Chemistry, Medical School



Monday, May 8, 2023

4:00 - 5:00 PM

Multipurpose Room #1040

LSA Building - 500 S. State Street

Zoom

Oral Defense

U-M Oral Dissertation

Decoding Regulatory Variants With Computational Methods in Non-coding Regions of the Human Genome


Nanxiang Zhao, Advisors: A. Boyle


Monday, April 24, 2023.

10:00 - 11:00 AM

East Conference Room, Rackham

U-M Oral Dissertation

Protein Phosphatase 2A Modulation Selectively Targets Cancer Cells by Activating Non-Canonical Pathways That Regulate Cell Fate in Response to Cellular Stress


Rita Avelar, Advisors: A. DiFeo


Monday, April 24, 2023.

1:30 - 2:30 PM

ABC Seminar Rooms, BSRB

U-M Oral Dissertation

Statistical & Computational Approaches for Data Integration & Constrained Variable Selection in Large Datasets


Lam Tran, Advisors: H. Jiang


Friday, April 28, 2023.

12:00 - 1:00 PM

SPH II M4332

U-M Oral Dissertation

Quantitative Techniques to Study Cancer Metabolism In-Vivo


Anjali Mittal, Advisors: D. Nagrath


Tuesday, May 2, 2023.

10:00 AM - 11:00 AM

NCRC10 G065

U-M Oral Dissertation

Investigating Spatial Organization & Physicochemical Interactions in Biomembranes: Tools & Insights


Thomas Shaw, Advisors: S. Veatch


Wednesday, May 3, 2023.

9:00 AM - 10:00 AM

Rackham East Conference Room

RNA SOCIETY

Lexogen RNA Expertise Blog Series

We are happy to introduce you to the LEXOGEN RNA EXPERTISE blog series, in which we will talk about various topics from the world of RNA and RNA-Seq, focusing on best practices, exciting applications, and more. 


Inspired by the RNA journal's April 2023 special edition, we dedicate our newest blog post to RNA therapeutics. 


RNA Therapeutics: The Future is Bright


RNA therapeutics are a rapidly expanding category of drugs based on RNA molecules aimed at treating or preventing diseases. Recent clinical success and primarily the breakthrough of a series of fast-tracked and effective messenger RNA (mRNA)-based vaccines helping to conquer the COVID-19 pandemic did not only make “RNA” a household name but also reignited and propelled research interest in RNA therapeutics.


This blog article will discuss the advantages of RNA therapeutics, concepts, and modes of action of different classes of RNA-based therapeutics. We will also give a glimpse into the RNA therapeutics currently being evaluated in clinical trials or having received approval.

28th Annual Meeting of the RNA Society: May 30th thru June 4th

RNA 2023 - the 28th Annual Meeting of the RNA Society - will be held at the Suntec Convention Center in downtown Singapore from May 30th - June 4th. 

 

Registration is now open

 

Look forward to seeing you there.

Job Posting

Post-doctoral Fellows - Markovitz Laboratory

The Markovitz laboratory is looking to add post-doctoral fellows to its ongoing efforts to explore basic disease mechanisms and devise new therapeutic strategies. We are looking for independent and motivated individuals who would like to work at the convergence of virology, cancer immunotherapy, and glycobiology. The glycobiology projects could involve studies of RNA if it suits the fellow’s interests. Housed in Internal Medicine, the Markovitz laboratory is also affiliated with programs in Molecular and Cellular Biology, Cancer Biology, and Immunology. Diversity in all respects is welcomed.


Interested candidates should forward a résumé and the names of three potential references to David Markovitz at dmarkov@umich.edu

News

RNA Therapeutics - April RNA Issue

Abstract: “RNA therapeutics” refers to a disease treatment or drug that utilizes RNA as a component. In this context, RNA may be the direct target of a small-molecule drug or RNA itself may be the drug, designed to bind to a protein, or to mimic or target another RNA. RNA has gained attention in the drug-development world, as recent clinical successes and breakthrough technologies have revolutionized the drug-like qualities of the molecule or its usefulness as a drug target. In this special issue of RNA, we gathered expert perspectives on the past, present, and future of the field, to serve as a primer and also a challenge to the broad scientific community to incorporate RNA into their experimental design and problem-solving process, and to imagine and realize the potential of RNA as a therapeutic drug or target.


Michelle L. Hastings1 and Adrian R. Krainer2


Corresponding author: krainer@cshl.edu


RNA Function Trainee Networking Event: May 17 2023

The Center for RNA Biomedicine's Student and Postdoc Council is hosting the second annual RNA Function event on Wednesday, May 17 from 11 AM to 2 PM in the BSRB ABC Seminar Rooms.


This is a low-stress environment where we invite trainees of all levels who are interested in RNA biology to come together to make connections with other trainees from across the university. The event will include a casual poster session as well as facilitated networking, with lunch provided for registered participants.


Please register here by May 10. We are looking forward to seeing you there!

Congratulation Jingxuan Tang - PPG Summer Research Fellowship Award

Jingxuan Tang has been selected as the department winner for the PPG Summer Research Fellowship Award.



Biophysical Society - Postdoctoral Reviewer Program

Biophysical Journal is accepting applications from postdocs who are members of The Biophysical Society to be Postdoctoral Reviewers. Successful Applicants will be paired with an Editor of the journal working in your research area to receive guidance and mentorship in learning how to review articles submitted for consideration by the journal. This program will give postdocs the opportunity to engage with the editorial board of the Biophysical Society’s flagship journal and to learn how to provide a complete and useful review of a paper, an essential task that contributes to the biophysics community.


Applications are due by July 1, 2023 for selected individuals to begin reviewing in September 2023.

Meetings

Cold Spring Harbor (CSH) Asia Meeting June 19 - 23

The Cold Spring Harbor (CSH) Asia meeting on The Now and Future of RNA Therapeutics: will be held June 19th-23rd, 2023 at the Awaji Yumebutai Conference Center in Awaji, Japan.


Please see the attached flyer and visit the website for full details, including travel information, venue, and accommodations: https://www.csh-asia.org/?content/1309


Abstracts are due: May 5th

Submit your abstract here: https://cshl.csh-asia.org/abstractsubchina/abstractsub.aspx

 

Keynote Speakers:

Lynne Maquat, University of Rochester Medical Center

Chuan He, University of Chicago

Don Cleveland, University of California San Diego

Tsutomu Suzuki, The University of Tokyo


Invited Speakers: 

Isabel Aznarez, Stoke Therapeutics

Vinod Balachandran, Memorial Sloan Kettering Cancer Center

Zicai Liang, Suzhou Ribo Life Science

Jinzhong Lin, Fudan University

Hiroshi Nishimasu, The University of Tokyo

Daniel Siegwart, UT Southwestern Medical Center

Osamu Takeuchi, Kyoto University

Willeke van Ron-Mom, Leden University Medical Centre

Takeshi Wada, The University of Tokyo

Yanli Wang, Institute of Biophysics, CAS

Ligang Wu, Shanghai Institute of Biochemistry and Cell Biology, CAS

Yuanchao Xue, Institute of Biophysics, CAS

Chengqi Yi, Peking University

Chen-Yu Zhang, Nanjing University

Qiangfeng Cliff Zhang, Tsinghua University

2023 NCI RNA Biology Symposium: April 27 - 28

RNA biology has emerged as one of the most influential areas in modern biology and biomedicine. The discovery of new classes of RNAs and their functions in a wide spectrum of biological processes has revolutionized molecular biology and has profound implications for clinical sciences. Key areas include the elucidation of RNA biogenesis and structure, the identification of functions for various classes of RNAs, the roles of RNA in disease and the emergence of RNA-based-and RNA-targeted therapies.

 

The symposium offers the opportunity to learn more about the current status of RNA biology in development and disease and share research with leading figures in the field and discuss the use and implications of these advances for clinical applications.


We hope you join us for the 2023 NCI RNA Biology symposium!


Registration is free but is required to attend. There will be no onsite registration. 


For conference-related questions, please contact ccrconferences@mail.nih.gov.


April 27-28, 2023

National Institutes of Health 9000 Rockville Pike Bethesda, Maryland 20892

Building 45 Natcher Auditorium

2023 RiboClub Annual Meeting: September 24 - 28

The RiboClub Annual Meeting aims at encouraging the exchange of ideas and stimulates collaborations between RNA biologists around the world. The meeting covers different topics related to the chemistry, structure and biology of RNA with emphasis on upcoming and debatable biological questions. In addition, every year the RiboClub puts the focus on a local or regional RNA group to highlight their efforts and introduce them to the international community.

The meeting format provides principal investigators the opportunity to present their point of views on the current state of knowledge and ignite the curiosity of young scientists. The meeting size and its format give ample opportunity for discussions and interactions, so bring your thinking hat to uncover the next big idea.

Registration fees are subsidized to encourage the participation of students and upcoming researchers. All laboratory members are invited to attend, listen to the presentations of leading scientists and participate in poster competition.


Annual Meeting September 24-28, 2023

Chéribourg Hotel, Orford, Quebec, Canada


Register by: June 30th, 2023

More Inforamtion :www.riboclub.org

Questions: riboclub@riboclub.org

Our members' publications are available through Altmetrics. Queries are currently available: CRISPR, microRNA, molecule, RNA, RNA therapeutics, transcriptome, and translation.


Below are recent highlights.

Mustoe AM, Weidmann CA, Weeks KM. Single-Molecule Correlated Chemical Probing: A Revolution in RNA Structure Analysis. Acc Chem Res. 2023 Apr 4;56(7):763-775. doi: 10.1021/acs.accounts.2c00782. Epub 2023 Mar 14. PMID: 36917683; PMCID: PMC10078950. https://pubs.acs.org/doi/10.1021/acs.accounts.2c00782


Mandal, S., Khanna, K., Johnson-Buck, A., & Walter, N. G. (2022). A guide to accelerated direct digital counting of single nucleic acid molecules by FRET-based intramolecular kinetic fingerprinting. Methods (San Diego, Calif.)197, 63–73. Highlighted in NCI's Epidemiology & Genomics Research Program (EGRP) https://doi.org/10.1016/j.ymeth.2021.06.014

Wang, E. T., Freudenreich, C. H., Gromak, N., Jain, A., Todd, P. K., & Nagai, Y. (2023). What repeat expansion disorders can teach us about the Central Dogma. Molecular cell, 83(3), 324–329. https://doi.org/10.1016/j.molcel.2022.12.017

To share your news and comments, please contact rna-communications@umich.edu

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