UCSF CCMBM Events & Opportunities Newsletter - February 2023
February 28-March 1, 2023, Mission Bay, Genentech Hall
Join this scientific event, entitled “A Picture of Pain: Advances in Management and Treatment” to explore the mechanistic foundations of pain science and how they intersect with musculoskeletal biology.
Registration is required. Remote participation is available by request.
Hosted by CCMBM, REACH & Department of Orthopaedic Surgery
February 28-March 1, 2023, Mission Bay, Genentech Hall
CCMBM, REACH and the Department of Orthopaedic Surgery invite all graduate students, postdocs, and other trainees to participate in this year's Poster Presentation. Prizes available! The deadline to submit abstracts is February 13th.

Sign up here.
Hosted by CCMBM, REACH & Department of Orthopaedic Surgery
February 16, 10:00am-1:00pm PT; Virtual Event
This virtual event aims to highlight the significance of the resources within BACPAC that are being developed such as clinical data and technology. BACPAC assets that are of interest to industry will be discussed with an emphasis on reaching out to new, potential companies who may be interested in joining CDMI.

Learn more and register here.
Hosted by CDMI
Application Deadline: April 1, 2023
The Grant Development Award provides funding for a junior CCMBM member to host a meeting (e.g., lunch or dinner) with 2–3 UCSF faculty members who are outside of the trainee’s current lab to: 
1) brainstorm/solicit informal feedback on a study idea or research direction
2) learn about the latest methods and techniques used in related fields
3) identify potential collaborators
4) promote inter-disciplinary MSK research
5) expand the trainee’s professional network
Recognizing the need for collaboration of MSK scientists with experts outside of the MSK field, we are providing support to MSK Center members to host a meal for a creative and enjoyable in-person networking meeting to stimulate these interactions and to further develop new research ideas and plans to fund them. Faculty, staff, and trainees who are MSKC/CCMBM members are encouraged to apply to host an event. 

Download the form and email your application to Cristal Yee
PARTNER EVENTS
February 8, 7:30am; Mission Bay, GenHall - Byers Auditorium
Isador Lieberman, MD, Visiting Professor, Department of Orthopaedic Surgery, UCSF and
Orthopaedic and Spinal Surgeon, Texas Back Institute
Cervical Pedicle Screws: Where Are We Now and Where Will We Go
Providing Spine Care in Uganda: Then & Now
Join via Zoom.
Hosted by UCSF Department of Orthopaedic Surgery
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February 8, 12:00pmMission Bay, Rock Hall, Auditorium RH102
Marco Vignuzzi, PhD, Singapore Agency for Science, Research and Technology, ID Labs
Hosted by Program in Pharmaceutical Sciences and Pharmacogenomics
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February 8, 4:00pm; Parnassus, N-225
Cynthia Moss, PhDProfessor of Psychological and Brain Sciences, Johns Hopkins University
Neural codes for 3D auditory localization in echolocating bats
Hosted by Biomedical Sciences Graduate Program
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February 8, 5:00-7:00pm; Mission Bay, MH-1407
Christopher He, DSCB Student, UCSF
Sneha Rao, DSCB Rotation Student, Crouch Lab, UCSF
RSVP to receive Zoom details.
Hosted by Developmental & Stem Cell Biology Graduate Program
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February 9, 8:00-9:00am; Virtual Event
Shawn Hervey-Jumper, MD, Associate Professor of Neurological Surgery, UCSF
Neural representations of cognition in glioma infiltrated cortex: implications for cancer therapies
Register to receive Zoom details.
Hosted by UCSF Department of Neurological Surgery, UCSF Weill Institute for Neurosciences
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February 9, 11:00am; Mission Bay, Rock Hall Auditorium
Daniel O'Shea, PhD, Research Engineer, Electrical Engineering, Stanford University
"Direct neural perturbations reveal a dynamical mechanism for robust computation"
Hosted by Neuroscience Graduate Program
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February 9, 12:00-1:00pm; Parnassus, HSW-300
Letitia Yang, BMS Graduate Student, Zikherman Lab, UCSF
Lexi Schneider, BMS Graduate Student, UCSF
Register to receive Zoom details.
Hosted by Biomedical Sciences Graduate Program
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February 10, 12:00pm; Parnassus, HSW-300
Emily Goldberg, PhD, Assistant Professor of Physiology UCSF
“Uncovering the mechanism of lysine beta-hydroxybutyrlation”
Hosted by UCSF Diabetes Center
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February 13, 9:00-10:00am; Parnassus, N-225
Elaine Hsiao, PhD, Associate Professor of Microbiology, Immunology and Molecular Genetics, UCLA
Register to receive Zoom details.
Hosted by ImmunoX
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February 14, 7:00-8:00am; Virtual Event
Stephen Hunter, PT, DPT, OCS, FAPTA, Intermountain Healthcare
You gotta love data! Improving Clinical Care Now and in the Future
Join via Zoom.
Hosted by UCSF Department of Physical Therapy and Rehabilitation Science
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February 14, 10:00-11:00am; Virtual Event
Natalie Whitis, PhD Student, Biochemistry and Molecular Biology, Agard Lab, UCSF
"Sorting Out Sorting Nexins: Understanding the role of the ESCPE-1 complex in Chlamydia trachomatis infection"
Hosted by iMicro
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February 14, 11:30am-1:00pm; Virtual Event
Claire Dubin, Bioinformatics Student, UCSF
Joseph Pepe, Biophysics Student, UCSF
Kevin Delgado-Cunningham, Biophysics Student, UCSF
Kingsley Chow, PSPG Student, UCSF
RSVP to receive Zoom details.
Hosted by PhD Degree Program in Biophysics
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February 14, 12:00-1:00pm; Virtual Event
Karen Hauer, MD, PhD, Professor of Medicine, UCSF
Inclusive research networks in medical education.
Register to receive Zoom details.
Hosted by UCSF Center for Faculty Educators
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February 15, 7:30am; Mission Bay, GenHall - Byers Auditorium
Bill Berrigan, MD, RMSK, Assistant Professor of Orthopaedic Surgery, UCSF
Orthobiologics in Orthopaedics
Join via Zoom.
Hosted by UCSF Department of Orthopaedic Surgery
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February 15, 11:30am-1:00pm; Mission Bay, HD-291
Hosted by Helen Diller Family Comprehensive Cancer Center
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February 15, 12:00pmMission Bay, Rock Hall, Auditorium RH102
Gilbert Di Paolo, Seth and Amy Christensen Distinguished Scientist and, Executive Director of Discovery Biology at Denali Therapeutics
Hosted by Program in Pharmaceutical Sciences and Pharmacogenomics
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February 15, 4:00pm; Parnassus, N-225
Karen Parker, PhDAssociate Professor and Associate Chair of Psychiatry and Behavioral Sciences, Stanford University
"Developing a monkey model to drive streamlined translation and clinical impact for autism"
Hosted by Biomedical Sciences Graduate Program
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February 16, 8:00-9:00am; Virtual Event
Christopher Ames, MD, Professor of Neurological Surgery, UCSF Weill Institute for Neurosciences
Aaron Clark, MD, PhD, Associate Professor of Neurological Surgery, UCSF Weill Institute for Neurosciences
Vedat Deviren, MD, Professor of Orthopaedic Surgery, UCSF 
Adult spinal deformity update: Osteotomies, minimally invasive surgery and prone lateral 
Register to receive Zoom details.
Hosted by UCSF Department of Neurological Surgery, UCSF Weill Institute for Neurosciences
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February 16, 12:00-1:00pm; Parnassus, HSW-300
Serena Lu, BMS Graduate Student, UCSF
Zack Mullin-Bernstein, BMS Graduate Student, Dumont Lab, UCSF
Register to receive Zoom details.
Hosted by Biomedical Sciences Graduate Program
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February 17, 12:00pm; Parnassus, N-217
Adriana Guajardo, DSCB Student, UCSF
Vasileios Papakis, DSCB Rotation Student, Kampmann Lab, UCSF
RSVP to receive Zoom details.
Hosted by Developmental & Stem Cell Biology Graduate Program
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February 17, 12:10-1:00pm; Parnassus, N-517
Sakeen Kashem, MD, PhD, Postdoctoral Scholar, Dermatology, School of Medicine, UCSF
Microbial landscaping of peripheral nervous system architecture and function
Kevin Magnaye, PhD, Postdoctoral Scholar, Lynch Lab, School of Medicine, UCSF
Maternal asthma and c-section birth associate with upper airway microbiota and methylation signatures in childhood that promote asthma
Join via Zoom.
Hosted by BCMM
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February 17, 12:00pm; Parnassus, HSW-300
Jennifer Umhoefer, Graduate Student, Marson Lab, Gladstone-UCSF Institute of Genomic Immunology
"Decoding regulatory T cell identity to inform better regulatory T cell therapies"
Hosted by UCSF Diabetes Center
February 17, 3:00-4:00pm; Mission Bay, HD-160
Donita Bradley, PhD, Professor, Abramson Family Cancer Research Institute, University of Pennsylvania
Molecular and Cellular Mechanisms of Copper-Dependent Nutrient Signaling and Metabolism in Cancer
Hosted by Helen Diller Family Comprehensive Cancer Center
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February 18, 2:00-3:00pm; Virtual Event
Sidharth Venkata Puram, MD, PhD, FACS, Assistant Professor, Division of Head and Neck Oncologic Surgery, Department of Otolaryngology - Head and Neck Surgery, Washington University in St. Louis School of Medicine
Hybrid Epithelial/Mesenchymal States in Head and Neck Cancer
RSVP to receive Zoom details.
Hosted by Oral, Head, and Neck Cancer Research Group
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February 21, 10:00-11:00am; Virtual Event
Lindsey Pieper, PhD Student, Biomedical Sciences, Turnbaugh Lab, UCSF
"The anaerobic metabolism regulator fnr is necessary for the degradation of food dyes and drugs by Escherichia coli"
Hosted by iMicro
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February 21, 11:30am-1:00pm; Virtual Event
Isiac Orr, Biophysics Student, UCSF
Karla Fonseca-Valencia, PSPG Student, UCSF
Mark Ware, PSPG Student, UCSF
Vineet Mathur, CCB Student, The Jun Group, UCSF
RSVP to receive Zoom details.
Hosted by PhD Degree Program in Biophysics
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February 21, 12:00-1:00pm; Virtual Event
Register to receive Zoom details.
Hosted by UCSF Center for Faculty Educators
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February 22, 7:30am; Mission Bay, GenHall - Byers Auditorium
Hunter Warwick, MD, Resident at Department of Orthopaedic Surgery, UCSF
Efficiency in Orthopaedics: Strategies to Optimize the Surgical Process
Join via Zoom.
Hosted by UCSF Department of Orthopaedic Surgery
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February 22, 11:00am-12:00pm; Virtual Event
Grace O'Connell, PhDAssociate Professor and Associate Dean in the College of Engineering, University of California, Berkeley
Register to receive Zoom details.
Hosted by L.I.S. BioConsulting
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February 22, 11:00am; Mission Bay, Mahley Auditorium
Bart De Strooper, MD, PhD, Professor at University of Leuven and University College London, Director at UK Dementia Research Institute
Microglia and astroglia contributions to Alzheimer’s Disease
Hosted by UCSF Weill Institute for Neurosciences & Gladstone Institutes
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February 22, 11:30am-1:00pm; Mission Bay, HD-291
Hosted by Helen Diller Family Comprehensive Cancer Center
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February 22, 12:00pmMission Bay, Rock Hall, Auditorium RH102
Jesse Dixon, MD, PhD, Assistant Professor, Gene Expression Laboratory, Salk Institute
Hosted by Program in Pharmaceutical Sciences and Pharmacogenomics
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February 22, 4:00pm; Parnassus, N-225
Elaine Lim, PhD, Assistant Professor of Molecular, Cell, and Cancer Biology, UMass Chan Medical School
"Transcriptomics-based dissection of cell type interactions using cerebral organoids in Autism and Alzheimer’s Disease"
Hosted by Biomedical Sciences Graduate Program
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February 22, 5:00-7:00pm; Mission Bay, MH-1407
Ricardo Espinosa Lima, PhD Student, UCSF
Rose Zhou, DSCB Rotation Student, UCSF
RSVP to receive Zoom details.
Hosted by Developmental & Stem Cell Biology Graduate Program
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February 23, 11:00am; Mission Bay, Mahley Auditorium
Anne Brunet, PhD, Professor of Genetics, Stanford University 
Hosted by UCSF Weill Institute for Neurosciences & Gladstone Institutes
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February 23, 12:00-1:00pm; Virtual Event
Tingting Yang, PhD, Associate Professor of Ophthalmic Sciences, Columbia University
The structure and function of bestrophins
Watch via livestream.
Hosted by Biophysics Graduate Program
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February 23, 12:00-1:00pm; Parnassus, N-225
Jingwen Ding, BMS Student, UCSF
Maddie Urbanek, BMS Student, UCSF
Register to receive Zoom details.
Hosted by Biomedical Sciences Graduate Program
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February 24, 12:00pm; Parnassus, HSW-302
Emily Corrigan, DSCB Student, UCSF
Sneha Rao, DSCB Rotation Student, Crouch Lab, UCSF
RSVP to receive Zoom details.
Hosted by Developmental & Stem Cell Biology Graduate Program
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February 24, 3:00-4:00pm; Mission Bay, HD-160
Henry Kim, MD, PhD, Professor of Pharmacology, Yonsei University College of Medicine
Prediction of genome editing tool efficiencies and functional evaluation of genetic variants
Hosted by Helen Diller Family Comprehensive Cancer Center
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February 27, 9:00-10:00am; Parnassus, N-225
Aviv Regev, PhD, Head and Executive Vice President, Genentech Research and Early Development
Register to receive Zoom details.
Hosted by ImmunoX
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February 28, 9:00am-12:00pm; Mission Bay, Genentech Hall, Byers Auditorium
QBI and Institute Pasteur scientists talk facilitating research innovation at the interface of infectious biology and quantitative sciences.
Registration required.
Hosted by Institut Pasteur and the Quantitative Bioscience INstitute
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February 28, 10:00-11:00am; Virtual Event
Rosa Rodriguez, Graduate Student, Microbiology and Immunology, Sil Lab, UCSF
"Discovery of a new family of virulence factors in the human fungal pathogen Histoplasma capsulatum"
Hosted by iMicro
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February 28, 11:30am-1:00pm; Virtual Event
Haley Ogasawara, CCB Student, UCSF
Thu Pham, PSPG Student, UCSF
Dani Rodea, Biophysics Student, UCSF
Connie Silva, PSPG Student, UCSF
RSVP to receive Zoom details.
Hosted by PhD Degree Program in Biophysics
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February 28, 12:00-1:00pm; Virtual Event
Register to receive Zoom details.
Hosted by UCSF Center for Faculty Educators
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February 28, 1:00-2:30pm; Parnassus, HSW-300
Lydia Finley, PhDAssociate Member, Cell Biology Program Memorial Sloan Kettering Cancer Center
“Metabolic regulation of cell fate decisions”
Join via Zoom.
Hosted by UCSF Broad Stem Cell Center
CAREER & PROFESSIONAL DEVELOPMENT EVENTS
February 8, 9:00-10:00am; Virtual Event
Electronic data repositories represent some of the newest channels of publishing scientific research results, often in conjunction with manuscript submission. Attendees should get an overview of the selection of the most significant and trusted research data repositories, and also specific recommendations regarding when, and where to publish research data and evidence using repositories.
Hosted by the UCSF Library
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February 8, 14, 15, 21, 22, 28, 2:00-3:00pm; Virtual Event
Introducing the virtual DSI Help Desk, a place to ask your general questions about data science including how to download software or code packages, prep for upcoming DSI classes, get started with programming, connect with data science expertise, and more.
Hosted by the UCSF Library
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February 14, 21, 28, 7:00-7:30am &
February 9, 16, 23, 12:00-12:30pm; Virtual Event
Schedule time to meet with an Educator. Bring your coding and documentation concerns. We are here to help you.
Zoom link.
Hosted by the Office of Healthcare Compliance and Privacy
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February 10, 9:00am-12:00pm; Virtual Event
This course will provide an introduction to SQL, the structured query language used to access relational databases. In this workshop, you'll learn how to import data into a database, run queries, filter results, aggregate data, and join multiple tables based on a common element. The focus of this class is on gaining familiarity with the SQL language for basic data analysis.  
Hosted by the UCSF Library
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February 10, 11:05am-12:00pm; Virtual Event
Part of DSI's WinteR of LeaRning Series. Requires familiarity with the materials from R for Everyone and R for Data Manipulation.
Hosted by the UCSF Library
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February 13, 1:00-2:00pm; Virtual Event
Have you heard of the new NIH Data Management and Sharing Policy but want to learn more about how to comply? Want some more guidance on writing your Data Management and Sharing Plan (DMS plan)? This workshop will quickly introduce the new policy and then work through each section of the DMS plan so you understand what to write and can start drafting your own plan.
Hosted by the UCSF Library
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February 13-17; Virtual Event
UC Love Data Week is a week-long offering of presentations and workshops focused on data access, management, security, sharing, and preservation. Whether you're working on qualitative or quantitative data, we've got events for you! All members of the University of California community are welcome to attend.
Hosted by the UCSF Library
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February 15, 12:00pm-1:30pm; Virtual Event
Join Makers Lab staff for the second pop-up in a three-part series covering the basics of 3D design & modeling using the web-based application Tinkercad. This pop-up is for beginners, but all skills levels are welcome to attend.
Hosted by the UCSF Library


February 15, 1:00-3:00pm; Virtual Event
Researchers interested in Digital Health Humanities approaches will learn about sourcing archival collections data from a number of UCSF’s health sciences archives collections, including those from the Industry Documents Library which encompasses documents from the tobacco, opioid, food, chemical, drug, and fossil fuel industries, all of which have impacts on public health. UCSF archivists will share highlights from digital collections, showcasing how these have been and can be used for computational research across a range of disciplines.
Hosted by the UCSF Library
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February 17, 9:00am-12:00pm; Virtual Event
Learn how to use Python to read data directly from Web APIs. You will use the Internet Archive API to search the tobacco archives and other UCSF collections, and the National Library of Medicine's JSON based web service to investigate drug interactions.
Hosted by the UCSF Library
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February 17, 11:05am-12:00pm; Virtual Event
Part of DSI's WinteR of LeaRning Series. Requires familiarity with the materials from R for Everyone and R for Data Manipulation.
Hosted by the UCSF Library
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February 21, 12:00-2:00pm; Virtual Event
This session is designed as a follow-up to the DSI workshop Reading Data from an API with Python and JSON, with support for learners interested in programming foundations and applications for digital health humanities research.
Hosted by the UCSF Library
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February 23, 12:00-1:00pm; Virtual Event
Go beyond Google search methods to get a handle on database logic. Build complex search strategies; try some PubMed tricks and tips, and set up alerts to stay informed when new articles are published in your field.
Hosted by the UCSF Library
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February 24, 9:00am-12:00pm; Virtual Event
Data obtained from the web or other outside sources is often messy and difficult to manage. Pandas, a popular tabular data frame library in Python, and SQL, a structured query language for databases, provide two different but effective tools for getting a better handle on your data. This workshop is designed to introduce you to both tools in the context of managing research data, demonstrate the strengths of each approach, and review how the two approaches can be particularly effective when used in combination.  
Hosted by the UCSF Library
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February 24, 11:05am-12:00pm; Virtual Event
Part of DSI's WinteR of LeaRning Series. Requires familiarity with the materials from R for Everyone and R for Data Manipulation.
Hosted by the UCSF Library
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February 28, 11:05am-12:00pm; Virtual Event
The Bay Area Open Science Group is intended to bring together students, faculty, and staff from the Stanford, UCSF, and Berkeley community to learn about open science, discuss the application of open science practices in a research context, and meet other members of the community who are interested in (or already are) incorporating open science practices into their work.
Hosted by the UCSF Library
CAREER & PROFESSIONAL DEVELOPMENT EVENTS FOR TRAINEES
(STUDENTS, POSTDOCS, RESIDENTS, FELLOWS)
February 21, 3:30-5:00pm; Virtual Event
Gain important knowledge about the following topics: Human Resources information and resources, Research grants – resources for finding your own funding, Careers – how to get the best job after UCSF, Ideas for maximizing your productivity and minimizing conflicts with your PI, and UAW Union Presentation.
Hosted by Office for Postdoctoral Scholars


March 1, 5:30-7:00pm; Virtual Event
Choosing a Thesis Lab is a program specifically for first year students in basic and biomedical science PhD programs. The program will walk you through the data you need to collect in order to make an informed decision about your thesis lab, help you think about your rotation experiences so far, and come up with a plan for how you will get the remaining data you need and make your decision.
Hosted by Office of Career and Professional Development

FUNDING & OTHER OPPORTUNITIES
Application Deadline: February 9, 2023
NIH will provide the qualifying institutions with the funds to seed the creation of academic entrepreneurship Hubs. Watch the recorded REACH Program Pre-Application Webinar to learn about the opportunity for five new Research Evaluation and Commercialization Hubs (REACH) to join NIH’s nationwide proof-of-concept network and receive $1 million per year for four years.
Information Session: February 9, 2023, 12:00-1:00pm (PT)
Application Deadline: March 31, 2023
The HHMI Investigator Program competition is open to basic researchers and physician scientists in basic biological and biomedical sciences in many scientific disciplines, at hundreds of institutions. Candidates apply directly to HHMI. Applications must be received by March 21, 2023. Information about this program and competition, including benefits of becoming an HHMI Investigator, may be found on the program page.

RSVP to join the live information session on February 9.
GRANT ALERT: Danone North America Public Benefit Corporation, announces its 11th Danone North America Gut Microbiome, Yogurt and Probiotics Fellowship Grant.
Application Deadline: February 14, 2023
As a part of our commitment to advancing the study of the gut microbiome on well-being, Danone will award $25,000 each to two graduate students who aim to explore how the gut microbiome, probiotics and yogurt helps support and maintain human health and wellness. Visit Danone for more information and how to apply.
Application Deadline: February 27, 2:00 PM
Established Investigators - $50,000 max; Early Career Investigators - $40,000 max. Research topics should be translational in nature and related to musculoskeletal disease. If you have any research questions in regards to applying, please contact Pui Yee Law 

Application Deadline: February 27, 2:00 PM
Both through the CCMBM and through NIH, funding is available to support mechanistic research in human musculoskeletal biology. CCMBM has partnered with CoLabs to stimulate use of the CoLabs resources to pursue clinically relevant and cutting edge unbiased analyses of human tissue in MSK disease with a special RFA for Pilot awards in the upcoming RAP cycle. Consultations with CoLabs are required before submission. In addition, the NIH HTORR program—co-funded by the NDRI and the NIAMS—provides investigators with donated tissues and organs from a diverse donor pool. Learn more on the NDRI website. 
Application Deadline: March 17, 2023
The UCSF Living Therapeutics Initiative (LTI) is issuing a new Request for Proposals (RFP) to drive cutting edge research and facilitate translating scientific innovation into the clinic. The LTI will consider cellular therapy proposals along the entire development continuum. However, for this call there is a particular interest in projects at pre-IND enabling studies and later. To support the GMP manufacturing of cellular therapies, UCSF has partnered with Thermo Fisher Scientific (TFS) on a new cGMP facility located on the Mission Bay campus dedicated to producing cellular products for testing in patients. 
 
Access to the applications with the full set of instructions can be found here.

Applications should be mailed as a single PDF to LTI@ucsf.edu by close of day March 17, 2023
 
If you have any questions, please reach out to Cammie Edwards, Director, Living Therapeutics Initiative: cammie.edwards@ucsf.edu.
ACKNOWLEDGING THE CCMBM

If you have received a CCMBM grant, used one of our cores, or formed a collaboration at one of our events that led to a publication, please acknowledge our Center in related publications and presentations. We suggest stating:

Research reported in this publication was supported by the National Institute of Arthritis and Musculoskeletal and Skin Diseases of the National Institutes of Health under Award Number P30AR075055. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.