Dear Jeannette ,

Check out our latest WCMC Newsletter!

- WCMC Outreach Core

We are looking forward to #MANA2023 in Columbia, MO. Come visit us at our oral presentations!

Bits & Bites # 07: Introduction to Metaboanalyst

November 2, 2023 @ 9 am - 5 pm PT

Instructor:  Dr. Jeff Xia, McGill University

In this short course, we will cover how to use MetaboAnalyst 5.0, a comprehensive platform dedicated to metabolomics data analysis. There will be a brief overview of data input, processing, and general workflow to perform PCA/PLS-DA/OPLS-DA analysis in MetaboAnalyst. More importantly, this course will cover how to use different functional analysis methods such as Enrichment Analysis, Pathway Analysis, Joint Pathway Analysis, and Network Analysis. Lastly, participants will also learn how to perform biomarker analysis and statistical analysis with complex metadata.

If you have any questions feel free to contact us!

Email: Jeannette Martins jmartins@ucdavis.edu

• Li, Y., et al. "Flash entropy search to query all mass spectral libraries in real time." Nature Methods (2023): 1-4.
• Bishop, L. M., et al. "Improving Quantitative Accuracy in Nontargeted Lipidomics by Evaluating Adduct Formation." Analytical Chemistry 95.34 (2023): 12683-12690.

We celebrate 10 years of WCMC with a Special Edition in the journal Metabolites.

See here!

• Dahabiyeh, L. A., et al. "Serum-Based Lipid Panels for Diagnosis of Idiopathic Parkinson’s Disease." Metabolites 13.9 (2023): 990.
• Brydges, C., et al. "Bayesian statistics improves biological interpretability of metabolomics data from human cohorts." Metabolites 13.9 (2023): 984.
• Cajka, T., et al. "Exploring the Impact of Organic Solvent Quality and Unusual Adduct Formation during LC-MS-Based Lipidomic Profiling." Metabolites 13.9 (2023): 966.
• Wang, S., et al. "Automatic Assignment of Molecular Ion Species to Elemental Formulas in Gas Chromatography/Methane Chemical Ionization Accurate Mass Spectrometry." Metabolites 13.8 (2023): 962.
• Zhang, Y., et al. "Sexual Dimorphism of the Mouse Plasma Metabolome Is Associated with Phenotypes of 30 Gene Knockout Lines." Metabolites 13.8 (2023): 947.
• Zhang, Y., et al. "Denoising Autoencoder Normalization for Large-Scale Untargeted Metabolomics by Gas Chromatography–Mass Spectrometry." Metabolites 13.8 (2023): 944.
• Bremer, P. L., et al. "SMetaS: A Sample Metadata Standardizer for Metabolomics." Metabolites 13.8 (2023): 941.
• Cumeras, R., et al. "Differences in the Stool Metabolome between Vegans and Omnivores: Analyzing the NIST Stool Reference Material." Metabolites 13.8 (2023): 921.
• Wen, A., et al. "The Impacts of Slc19a3 Deletion and Intestinal SLC19A3 Insertion on Thiamine Distribution and Brain Metabolism in the Mouse." Metabolites 13.8 (2023): 885.
• Jess, A. T., et al. "Short-Chain Fatty Acid Levels after Fecal Microbiota Transplantation in a Pediatric Cohort with Recurrent Clostridioides difficile Infection." Metabolites 13.10 (2023): 1039.

UC Davis West Coast Metabolomics Center

451 Health Sciences Dr. Rm 1313

Davis, CA 95616

Phone: (530) 752-8129

If you have any questions contact us: metabolomics@ucdavis.edu